Version 5.4
Mus musculus Gene: Luc7l2
Summary
InnateDB Gene IDBG-137467.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Luc7l2
Gene Name LUC7-like 2 (S. cerevisiae)
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000029823
Encoded Proteins
IDBP-137469
LUC7-like 2 (S. cerevisiae)
IDBP-532390
LUC7-like 2 (S. cerevisiae)
IDBP-536098
LUC7-like 2 (S. cerevisiae)
IDBP-533093
LUC7-like 2 (S. cerevisiae)
IDBP-533174
LUC7-like 2 (S. cerevisiae)
IDBP-532729
LUC7-like 2 (S. cerevisiae)
IDBP-533551
LUC7-like 2 (S. cerevisiae)
IDBP-536423
LUC7-like 2 (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000146963:
This locus represents naturally occurring readthrough transcription between the neighboring C7orf55 (chromosome 7 open reading frame 55) and LUC7L2 (LUC7-like 2) genes on chromosome 7. The readthrough transcript encodes a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, Jul 2012] This gene encodes a protein that contains a C2H2-type zinc finger, coiled-coil region and arginine, serine-rich (RS) domain. A similar protein in mouse interacts with sodium channel modifier 1, and the encoded protein may be involved in the recognition of non-consensus splice donor sites in association with the U1 snRNP spliceosomal subunit. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Sep 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:38551334-38609470
Strand Forward strand
Band B1
Transcripts
ENSMUST00000057692 ENSMUSP00000055254
ENSMUST00000163047 ENSMUSP00000125394
ENSMUST00000161538 ENSMUSP00000124010
ENSMUST00000162386 ENSMUSP00000125573
ENSMUST00000160922
ENSMUST00000162718
ENSMUST00000163012
ENSMUST00000161227 ENSMUSP00000125111
ENSMUST00000160582
ENSMUST00000159936 ENSMUSP00000123970
ENSMUST00000160511 ENSMUSP00000125527
ENSMUST00000162530
ENSMUST00000160430 ENSMUSP00000124686
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 18 experimentally validated interaction(s) in this database.
They are also associated with 66 interaction(s) predicted by orthology.
Experimentally validated
Total 18 [view]
Protein-Protein 17 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 66 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003729 mRNA binding
Biological Process
GO:0006376 mRNA splice site selection
Cellular Component
GO:0005685 U1 snRNP
GO:0016607 nuclear speck
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000146963
View Gene Order
ENSBTAG00000017770
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.276133 Mm.417366 Mm.470909 Mm.479854 Mm.482544 Mm.487618
RefSeq NM_001170848 NM_001170849 NM_138680 XM_006505749 XM_006505750 XM_006505751 XM_006505752 XM_006505753 XM_006505756
OMIM
CCDS CCDS20015 CCDS51751
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca