Version 5.4
Mus musculus Gene: Imp4
Summary
InnateDB Gene IDBG-143158.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Imp4
Gene Name IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
Synonyms AA409888; AV031295; D1Wsu40e
Species Mus musculus
Ensembl Gene ENSMUSG00000026127
Encoded Proteins
IDBP-143160
IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
IDBP-533317
IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
IDBP-539563
IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000136718:
IMP4 forms a ternary complex with IMP3 (MIM 612980) and MPP10 (MPHOSPHO10; MIM 605503) that interacts with U3 small nucleolar RNA (snoRNA), which is required for the early cleavage steps in pre-rRNA processing (Granneman et al., 2003 [PubMed 12655004]).[supplied by OMIM, Aug 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 1:34439851-34449356
Strand Forward strand
Band B
Transcripts
ENSMUST00000027303 ENSMUSP00000027303
ENSMUST00000149962
ENSMUST00000137794 ENSMUSP00000121452
ENSMUST00000134327
ENSMUST00000128086
ENSMUST00000136770 ENSMUSP00000120823
ENSMUST00000187077
ENSMUST00000191000
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0030519 snoRNP binding
Biological Process
GO:0006364 rRNA processing
Cellular Component
GO:0005730 nucleolus
GO:0030529 ribonucleoprotein complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000136718
View Gene Order
ENSBTAG00000003225
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.396576
RefSeq NM_178601
OMIM
CCDS CCDS35536
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca