Version 5.4
Mus musculus Gene: Rpgrip1
Summary
InnateDB Gene IDBG-148844.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rpgrip1
Gene Name retinitis pigmentosa GTPase regulator interacting protein 1
Synonyms 0610005A07Rik; 4930401L23Rik; 4930505G06Rik; A930002K18Rik; AA415034; nmf247
Species Mus musculus
Ensembl Gene ENSMUSG00000057132
Encoded Proteins
IDBP-257762
retinitis pigmentosa GTPase regulator interacting protein 1
IDBP-257764
retinitis pigmentosa GTPase regulator interacting protein 1
IDBP-716665
IDBP-718921
IDBP-718306
IDBP-717148
IDBP-718846
IDBP-718288
IDBP-716262
IDBP-716315
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000092200:
This gene encodes a photoreceptor protein that interacts with retinitis pigmentosa GTPase regulator protein and is a key component of cone and rod photoreceptor cells. Mutations in this gene lead to autosomal recessive congenital blindness. [provided by RefSeq, Oct 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 14:52110704-52163546
Strand Forward strand
Band C2
Transcripts
ENSMUST00000111603 ENSMUSP00000107230
ENSMUST00000111600 ENSMUSP00000107227
ENSMUST00000181862
ENSMUST00000181401 ENSMUSP00000138027
ENSMUST00000181208
ENSMUST00000181736 ENSMUSP00000137892
ENSMUST00000181673
ENSMUST00000180388
ENSMUST00000181709 ENSMUSP00000137664
ENSMUST00000180433
ENSMUST00000180901
ENSMUST00000180484
ENSMUST00000181823
ENSMUST00000180646 ENSMUSP00000137751
ENSMUST00000181017 ENSMUSP00000137900
ENSMUST00000180513 ENSMUSP00000137991
ENSMUST00000181627 ENSMUSP00000137840
ENSMUST00000180500 ENSMUSP00000137667
ENSMUST00000181297
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0007601 visual perception
GO:0042462 eye photoreceptor cell development
GO:0050896 response to stimulus
GO:0060041 retina development in camera-type eye
Cellular Component
GO:0005929 cilium
GO:0005930 axoneme
GO:0031513 nonmotile primary cilium
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000092200
View Gene Order
ENSBTAG00000004694
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene 77945
UniGene Mm.21662 Mm.439639 Mm.487226
RefSeq NM_001168515 NM_023879 XM_006519689 XM_006519690 XM_006519692
OMIM
CCDS CCDS36918 CCDS49490
HPRD
IMGT
MGI ID MGI:1932134
MGI Symbol Rpgrip1
EMBL
GenPept
RNA Seq Atlas 77945

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca