Version 5.4
Mus musculus Gene: Smg9
Summary
InnateDB Gene IDBG-154765.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Smg9
Gene Name smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)
Synonyms 1500002O20Rik; AI429693; N28092
Species Mus musculus
Ensembl Gene ENSMUSG00000002210
Encoded Proteins
IDBP-154767
RIKEN cDNA 1500002O20 gene
IDBP-264546
RIKEN cDNA 1500002O20 gene
IDBP-540407
RIKEN cDNA 1500002O20 gene
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000105771:
Gene Information
Type Protein coding
Genomic Location Chromosome 7:24399619-24422778
Strand Forward strand
Band A3
Transcripts
ENSMUST00000002280 ENSMUSP00000002280
ENSMUST00000108434 ENSMUSP00000104073
ENSMUST00000146381
ENSMUST00000139481
ENSMUST00000148288
ENSMUST00000123188 ENSMUSP00000114943
ENSMUST00000146686
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 11 interaction(s) predicted by orthology.
Predicted by orthology
Total 11 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Cellular Component
GO:0005622 intracellular
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000105771
View Gene Order
ENSBTAG00000011815
Not yet available
Pathways
NETPATH
REACTOME
REACT_198522
Nonsense-Mediated Decay (NMD) pathway
REACT_198528
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) pathway
REACT_233572
Gene Expression pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_75822
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) pathway
REACT_75886
Nonsense-Mediated Decay (NMD) pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.150977
RefSeq NM_028047 XM_006540377 XM_006540378 XM_006540379
OMIM
CCDS CCDS20949
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca