InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Gene: Snrpd3

Summary

InnateDB Gene

IDBG-162827.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Snrpd3

Gene Name

small nuclear ribonucleoprotein D3

Synonyms

1700043E15Rik; 2310009E13Rik; AW046420; SMD3

Species

Mus musculus

Ensembl Gene

ENSMUSG00000020180

Encoded Proteins

IDBP-162829

small nuclear ribonucleoprotein D3

Protein Structure

Useful resources

Stemformatics EHFPI ImmGen

Entrez Gene

Summary

This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000100028:
The protein encoded by this gene belongs to the small nuclear ribonucleoprotein core protein family. It is required for pre-mRNA splicing and small nuclear ribonucleoprotein biogenesis. [provided by RefSeq, Jul 2008]
This gene encodes a core component of the spliceosome, which is a nuclear ribonucleoprotein complex that functions in pre-mRNA splicing. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]

Gene Information

Type

Protein coding

Genomic Location

Chromosome 10:75517551-75537373

Strand

Forward strand

Band

Transcripts

ENSMUST00000020397	ENSMUSP00000020397
ENSMUST00000191097

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 15 experimentally validated interaction(s) in this database.
They are also associated with 66 interaction(s) predicted by orthology.

Experimentally validated
Total	15 [view]
Protein-Protein	15 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	66 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005515	protein binding
GO:0019899	enzyme binding
GO:0044822	poly(A) RNA binding
GO:0071208	histone pre-mRNA DCP binding

Biological Process

GO:0000387

spliceosomal snRNP assembly

Cellular Component

GO:0005634	nucleus
GO:0005683	U7 snRNP
GO:0005685	U1 snRNP
GO:0005687	U4 snRNP
GO:0005689	U12-type spliceosomal complex
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0034709	methylosome
GO:0034715	pICln-Sm protein complex
GO:0034719	SMN-Sm protein complex
GO:0070062	extracellular vesicular exosome
GO:0071013	catalytic step 2 spliceosome