Homo sapiens Gene: SCAF4
Summary
InnateDB Gene IDBG-1636.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SCAF4
Gene Name SR-related CTD-associated factor 4
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000156304
Encoded Proteins
SR-related CTD-associated factor 4
SR-related CTD-associated factor 4
SR-related CTD-associated factor 4
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene likely encodes a member of the arginine/serine-rich splicing factor family. A similar protein in Rat appears to bind the large subunit of RNA polymerase II and provide a link between transcription and pre-mRNA splicing. Alternatively spliced transcript variants have been described. [provided by RefSeq, Feb 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 21:31671033-31732075
Strand Reverse strand
Band q22.11
Transcripts
ENST00000286835 ENSP00000286835
ENST00000399804 ENSP00000382703
ENST00000434667 ENSP00000402377
ENST00000467731
ENST00000472318
ENST00000485790
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 24 experimentally validated interaction(s) in this database.
Experimentally validated
Total 24 [view]
Protein-Protein 24 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0044822 poly(A) RNA binding
Biological Process
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
Not yet available
SSD Ortholog
Ortholog supports species divergence
Cross-References
SwissProt O95104
TrEMBL
UniProt Splice Variant
Entrez Gene 57466
UniGene Hs.17255
RefSeq NM_001145445 XM_006724036 NM_001145444 NM_020706 XM_006724035
HUGO HGNC:19304
OMIM
CCDS CCDS46644 CCDS33537 CCDS54482
HPRD 11551
IMGT
EMBL AB032998 AF023142 AK308406 AL117417 AL834304 AP001711 BC014921 BC052286 BC064990
GenPept AAD09327 AAH14921 AAH52286 AAH64990 BAA86486 CAB55911 CAD38974
RNA Seq Atlas 57466