Version 5.4
Mus musculus Gene: Bdp1
Summary
InnateDB Gene IDBG-176866.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Bdp1
Gene Name B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000049658
Encoded Proteins
IDBP-176868
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
IDBP-176870
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
IDBP-262514
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
IDBP-624906
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
IDBP-624908
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000145734:
The product of this gene is a subunit of the TFIIIB transcription initiation complex, which recruits RNA polymerase III to target promoters in order to initiate transcription. The encoded protein localizes to concentrated aggregates in the nucleus, and is required for transcription from all three types of polymerase III promoters. It is phosphorylated by casein kinase II during mitosis, resulting in its release from chromatin and suppression of polymerase III transcription. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 13:100017994-100104070
Strand Reverse strand
Band D1
Transcripts
ENSMUST00000038104 ENSMUSP00000038321
ENSMUST00000099262 ENSMUSP00000096868
ENSMUST00000109379 ENSMUSP00000105005
ENSMUST00000105697
ENSMUST00000167815
ENSMUST00000167203 ENSMUSP00000131557
ENSMUST00000163097 ENSMUSP00000126435
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003682 chromatin binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000145734
View Gene Order
ENSBTAG00000000363
Not yet available
Pathways
NETPATH
REACTOME
REACT_244415
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
REACT_233104
RNA Polymerase III Transcription Initiation pathway
REACT_250309
RNA Polymerase III Transcription Initiation From Type 1 Promoter pathway
REACT_251592
RNA Polymerase III Transcription Initiation From Type 2 Promoter pathway
REACT_261233
RNA Polymerase III Abortive And Retractive Initiation pathway
REACT_233572
Gene Expression pathway
REACT_237241
RNA Polymerase III Transcription pathway
REACT_240508
RNA Polymerase III Transcription Initiation From Type 3 Promoter pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_22339
RNA Polymerase III Abortive And Retractive Initiation pathway
REACT_571
RNA Polymerase III Transcription Initiation From Type 3 Promoter pathway
REACT_1036
RNA Polymerase III Transcription Initiation From Type 2 Promoter pathway
REACT_347
RNA Polymerase III Transcription Initiation From Type 1 Promoter pathway
REACT_281
RNA Polymerase III Transcription Initiation pathway
REACT_1371
RNA Polymerase III Transcription pathway
REACT_21352
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt Q571C7
TrEMBL E9PYY8
UniProt Splice Variant
Entrez Gene 544971
UniGene Mm.288546 Mm.473050
RefSeq NM_001081061 XM_006517725
OMIM
CCDS CCDS49343
HPRD
IMGT
MGI ID MGI:1347077
MGI Symbol Bdp1
EMBL AK090184 AK220262 BC030359 CT025569 CT030167
GenPept AAH30359 BAC41127 BAD90187
RNA Seq Atlas 544971

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca