InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Gene: Cmtm3

Summary

InnateDB Gene

IDBG-185361.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Cmtm3

Gene Name

CKLF-like MARVEL transmembrane domain containing 3

Synonyms

9430096L06Rik; AI413895; BNAS2; Cklfsf3

Species

Mus musculus

Ensembl Gene

ENSMUSG00000031875

Encoded Proteins

IDBP-185363

CKLF-like MARVEL transmembrane domain containing 3

Protein Structure

Useful resources

Stemformatics EHFPI ImmGen

Entrez Gene

Summary

This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000140931:
This gene belongs to the chemokine-like factor gene superfamily, a novel family that is similar to the chemokine and the transmembrane 4 superfamilies of signaling molecules. This gene is one of several chemokine-like factor genes located in a cluster on chromosome 16. Alternatively spliced transcript variants containing different 5' UTRs, but encoding the same protein, have been identified. [provided by RefSeq, Jul 2008]

Gene Information

Type

Protein coding

Genomic Location

Chromosome 8:104340594-104347672

Strand

Forward strand

Band

Transcripts

ENSMUST00000034343

ENSMUSP00000034343

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.

Experimentally validated
Total	4 [view]
Protein-Protein	4 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	4 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005125	cytokine activity
GO:0005515	protein binding

Biological Process

GO:0006935	chemotaxis
GO:0050861	positive regulation of B cell receptor signaling pathway

Cellular Component

GO:0005615	extracellular space
GO:0005737	cytoplasm
GO:0016020	membrane
GO:0016021	integral component of membrane
GO:0031965	nuclear membrane

Orthologs

Species

Homo sapiens

Bos taurus

Gene ID

Gene Order

ENSG00000140931

View Gene Order

ENSBTAG00000047654

Not yet available

Pathway Predictions based on Human Orthology Data

NETPATH

NetPath_12

BCR pathway

REACTOME

KEGG

INOH

PID NCI

Cross-References

SwissProt

TrEMBL

UniProt Splice Variant

Entrez Gene

UniGene

Mm.390108

RefSeq

NM_024217 XM_006531326 XM_006531327 XM_006531328 XM_006531329

OMIM

CCDS

CCDS22577

HPRD

IMGT

MGI ID

MGI Symbol

EMBL

GenPept

RNA Seq Atlas