Version 5.4
Mus musculus Gene: Zkscan6
Summary
InnateDB Gene IDBG-186576.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Zkscan6
Gene Name zinc finger with KRAB and SCAN domains 6
Synonyms 1700128E15Rik; D11Ertd714e; KOX11; Zfp535; Znf18
Species Mus musculus
Ensembl Gene ENSMUSG00000018347
Encoded Proteins
IDBP-186578
zinc finger with KRAB and SCAN domains 6
IDBP-186580
zinc finger with KRAB and SCAN domains 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000154957:
Gene Information
Type Protein coding
Genomic Location Chromosome 11:65807175-65829239
Strand Forward strand
Band B3
Transcripts
ENSMUST00000071465 ENSMUSP00000071406
ENSMUST00000018491 ENSMUSP00000018491
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000981 sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of transcription, DNA-templated
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0006366 transcription from RNA polymerase II promoter
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000154957
View Gene Order
ENSBTAG00000004675
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_12627
Generic Transcription Pathway pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt Q810A1
TrEMBL
UniProt Splice Variant
Entrez Gene 52712
UniGene Mm.340052
RefSeq XM_006533716 XM_006533718 XM_006533719 NM_026107 XM_006533717
OMIM
CCDS CCDS24845
HPRD
IMGT
MGI ID MGI:1289293
MGI Symbol Zkscan6
EMBL AK007308 AL596025 BC043075
GenPept AAH43075 BAB24947 CAI24583
RNA Seq Atlas 52712

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca