Version 5.4
Mus musculus Gene: Lin7a
Summary
InnateDB Gene IDBG-189088.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Lin7a
Gene Name lin-7 homolog A (C. elegans)
Synonyms AI848705; LIN-7A; MALS-1; TIP-33; Veli; Veli1
Species Mus musculus
Ensembl Gene ENSMUSG00000019906
Encoded Proteins
IDBP-189090
lin-7 homolog A (C. elegans)
IDBP-271215
lin-7 homolog A (C. elegans)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000111052:
Gene Information
Type Protein coding
Genomic Location Chromosome 10:107271843-107425143
Strand Forward strand
Band D1
Transcripts
ENSMUST00000020057 ENSMUSP00000020057
ENSMUST00000105280 ENSMUSP00000100916
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 11 interaction(s) predicted by orthology.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 11 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0030165 PDZ domain binding
GO:0097016 L27 domain binding
Biological Process
GO:0006887 exocytosis
GO:0007269 neurotransmitter secretion
GO:0015031 protein transport
GO:0048489 synaptic vesicle transport
GO:0048839 inner ear development
Cellular Component
GO:0005923 tight junction
GO:0014069 postsynaptic density
GO:0016020 membrane
GO:0016323 basolateral plasma membrane
GO:0043005 neuron projection
GO:0045202 synapse
GO:0045211 postsynaptic membrane
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000111052
View Gene Order
ENSBTAG00000011367
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
INOH
PID NCI
Cross-References
SwissProt Q8JZS0
TrEMBL Q3TUM0
UniProt Splice Variant
Entrez Gene 108030
UniGene Mm.268025
RefSeq NM_001039354 XM_006513031 XM_006513032 NM_001033223 NM_001284329
OMIM
CCDS CCDS24160 CCDS36050
HPRD
IMGT
MGI ID MGI:2135609
MGI Symbol Lin7a
EMBL AC116325 AC140338 AC155168 AK160671 BC029721 BY123635 CH466539
GenPept AAH29721 BAE35951 EDL21692 EDL21694
RNA Seq Atlas 108030

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca