Version 5.4
Mus musculus Gene: Lrrc4c
Summary
InnateDB Gene IDBG-193102.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Lrrc4c
Gene Name leucine rich repeat containing 4C
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000050587
Encoded Proteins
IDBP-625415
leucine rich repeat containing 4C
IDBP-625409
leucine rich repeat containing 4C
IDBP-541698
leucine rich repeat containing 4C
IDBP-625418
leucine rich repeat containing 4C
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000148948:
NGL1 is a specific binding partner for netrin G1 (NTNG1; MIM 608818), which is a member of the netrin family of axon guidance molecules (Lin et al., 2003 [PubMed 14595443]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:96318169-97631666
Strand Forward strand
Band E1
Transcripts
ENSMUST00000059049 ENSMUSP00000131795
ENSMUST00000135431 ENSMUSP00000130984
ENSMUST00000162807 ENSMUSP00000125218
ENSMUST00000170144 ENSMUSP00000128490
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0050770 regulation of axonogenesis
Cellular Component
GO:0005615 extracellular space
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0030054 cell junction
GO:0045211 postsynaptic membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000148948
View Gene Order
ENSBTAG00000007324
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu04360
Axon guidance pathway
mmu04514
Cell adhesion molecules (CAMs) pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa04514
Cell adhesion molecules (CAMs) pathway
hsa04360
Axon guidance pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene 241568
UniGene Mm.241682 Mm.481338
RefSeq NM_001289742 NM_001289743 NM_178725
OMIM
CCDS CCDS16460
HPRD
IMGT
MGI ID MGI:2442636
MGI Symbol Lrrc4c
EMBL
GenPept
RNA Seq Atlas 241568

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca