Mus musculus Gene: Gtf2f1
Summary
InnateDB Gene IDBG-193303.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Gtf2f1
Gene Name general transcription factor IIF, polypeptide 1
Synonyms 2810405L04Rik; C76800; RAP74;
Species Mus musculus
Ensembl Gene ENSMUSG00000002658
Encoded Proteins
general transcription factor IIF, polypeptide 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000125651:
Gene Information
Type Protein coding
Genomic Location Chromosome 17:57003405-57011288
Strand Reverse strand
Band D
Transcripts
ENSMUST00000002733 ENSMUSP00000002733
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 57 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 57 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003824 catalytic activity
GO:0005515 protein binding
GO:0008134 transcription factor binding
GO:0019211 phosphatase activator activity
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006367 transcription initiation from RNA polymerase II promoter
GO:0009615 response to virus
GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter
GO:0043085 positive regulation of catalytic activity
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
GO:0030054 cell junction
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
Not yet available
SSD Ortholog
Ortholog supports species divergence
Pathways
NETPATH
REACTOME
RNA Polymerase II Transcription Initiation And Promoter Clearance pathway
Formation of the Early Elongation Complex pathway
mRNA Splicing pathway
RNA Polymerase II Transcription Initiation pathway
mRNA Splicing - Minor Pathway pathway
RNA Polymerase II Promoter Escape pathway
Formation of RNA Pol II elongation complex pathway
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening pathway
RNA Polymerase II Transcription Elongation pathway
RNA Polymerase II Pre-transcription Events pathway
mRNA Capping pathway
Gene Expression pathway
mRNA Splicing - Major Pathway pathway
Processing of Capped Intron-Containing Pre-mRNA pathway
RNA Polymerase II Transcription pathway
RNA Pol II CTD phosphorylation and interaction with CE pathway
KEGG
Basal transcription factors pathway
INOH
PID BIOCARTA
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
AndrogenReceptor pathway
REACTOME
RNA Polymerase II Transcription Initiation pathway
Formation of the Early Elongation Complex pathway
Influenza Infection pathway
Pausing and recovery of Tat-mediated HIV elongation pathway
Late Phase of HIV Life Cycle pathway
mRNA Splicing - Minor Pathway pathway
Viral Messenger RNA Synthesis pathway
RNA Pol II CTD phosphorylation and interaction with CE pathway
Influenza Viral RNA Transcription and Replication pathway
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening pathway
Processing of Capped Intron-Containing Pre-mRNA pathway
Formation of HIV-1 elongation complex containing HIV-1 Tat pathway
Tat-mediated elongation of the HIV-1 transcript pathway
Abortive elongation of HIV-1 transcript in the absence of Tat pathway
Tat-mediated HIV elongation arrest and recovery pathway
Formation of RNA Pol II elongation complex pathway
HIV Transcription Elongation pathway
Formation of HIV elongation complex in the absence of HIV Tat pathway
RNA Polymerase II Transcription pathway
RNA Polymerase II HIV Promoter Escape pathway
Pausing and recovery of HIV elongation pathway
RNA Polymerase II Promoter Escape pathway
HIV Life Cycle pathway
HIV elongation arrest and recovery pathway
RNA Polymerase II Pre-transcription Events pathway
mRNA Capping pathway
Transcription of the HIV genome pathway
RNA Pol II CTD phosphorylation and interaction with CE pathway
RNA Polymerase II Transcription Elongation pathway
HIV Infection pathway
Influenza Life Cycle pathway
mRNA Splicing pathway
HIV Transcription Initiation pathway
Formation of the HIV-1 Early Elongation Complex pathway
Gene Expression pathway
Disease pathway
RNA Polymerase II Transcription Initiation And Promoter Clearance pathway
mRNA Splicing - Major Pathway pathway
RNA Polymerase II Transcription pathway
mRNA Capping pathway
mRNA Splicing - Major Pathway pathway
mRNA Splicing pathway
RNA Polymerase II Pre-transcription Events pathway
RNA Polymerase II Promoter Escape pathway
Gene Expression pathway
Processing of Capped Intron-Containing Pre-mRNA pathway
RNA Polymerase II Transcription Elongation pathway
Formation of RNA Pol II elongation complex pathway
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening pathway
mRNA Splicing - Minor Pathway pathway
RNA Pol II CTD phosphorylation and interaction with CE pathway
RNA Polymerase II Transcription Initiation And Promoter Clearance pathway
RNA Polymerase II Transcription Initiation pathway
Formation of the Early Elongation Complex pathway
KEGG
Basal transcription factors pathway
INOH
PID BIOCARTA
Nuclear receptors coordinate the activities of chromatin remodeling complexes and coactivators to facilitate initiation of transcription in carcinoma cells [Biocarta view]
The information processing pathway at the ifn beta enhancer [Biocarta view]
Carm1 and regulation of the estrogen receptor [Biocarta view]
Chromatin remodeling by hswi/snf atp-dependent complexes [Biocarta view]
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.24632
RefSeq NM_133801 XM_006525194
OMIM
CCDS CCDS37667
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas