Version 5.4
Mus musculus Gene: Clip2
Summary
InnateDB Gene IDBG-202871.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Clip2
Gene Name CAP-GLY domain containing linker protein 2
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000063146
Encoded Proteins
IDBP-202873
CAP-GLY domain containing linker protein 2
IDBP-202875
CAP-GLY domain containing linker protein 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000106665:
The protein encoded by this gene belongs to the family of cytoplasmic linker proteins, which have been proposed to mediate the interaction between specific membranous organelles and microtubules. This protein was found to associate with both microtubules and an organelle called the dendritic lamellar body. This gene is hemizygously deleted in Williams syndrome, a multisystem developmental disorder caused by the deletion of contiguous genes at 7q11.23. Alternative splicing of this gene generates 2 transcript variants. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:134489386-134552434
Strand Reverse strand
Band G2
Transcripts
ENSMUST00000100647 ENSMUSP00000098212
ENSMUST00000036999 ENSMUSP00000037431
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0051010 microtubule plus-end binding
Biological Process
GO:0016192 vesicle-mediated transport
Cellular Component
GO:0005881 cytoplasmic microtubule
GO:0016020 membrane
GO:0035371 microtubule plus-end
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000106665
View Gene Order
ENSBTAG00000011875
Not yet available
Cross-References
SwissProt Q9Z0H8
TrEMBL
UniProt Splice Variant
Entrez Gene 269713
UniGene Mm.255138
RefSeq NM_001039162 NM_009990 XM_006504425 XM_006504426 XM_006504427
OMIM
CCDS CCDS39309 CCDS39310
HPRD
IMGT
MGI ID MGI:1313136
MGI Symbol Clip2
EMBL AF289664 AF289667 AJ228863 AJ228865 AJ228866 AJ228867 AJ228868 AJ228869 AJ228870 AJ228871 AJ228872 AJ228873 AJ228874 AJ228875 AJ228876 AJ228877 AJ228878 AJ228879 AJ228880 BC039162 BC053048
GenPept AAF99333 AAF99340 AAH39162 AAH53048 CAA13068 CAA13069
RNA Seq Atlas 269713

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca