Version 5.4
Homo sapiens Gene: SPARCL1
Summary
InnateDB Gene IDBG-29103.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SPARCL1
Gene Name SPARC-like 1 (hevin)
Synonyms MAST 9; MAST9; PIG33; SC1
Species Homo sapiens
Ensembl Gene ENSG00000152583
Encoded Proteins
IDBP-29105
SPARC-like 1 (hevin)
IDBP-373974
SPARC-like 1 (hevin)
IDBP-373978
SPARC-like 1 (hevin)
IDBP-373982
SPARC-like 1 (hevin)
IDBP-475725
SPARC-like 1 (hevin)
IDBP-481963
SPARC-like 1 (hevin)
IDBP-473898
SPARC-like 1 (hevin)
IDBP-600092
SPARC-like 1 (hevin)
IDBP-596236
SPARC-like 1 (hevin)
IDBP-597687
SPARC-like 1 (hevin)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 4:87473335-87531061
Strand Reverse strand
Band q22.1
Transcripts
ENST00000282470 ENSP00000282470
ENST00000458304 ENSP00000406251
ENST00000418378 ENSP00000414856
ENST00000434434 ENSP00000416971
ENST00000503414 ENSP00000422903
ENST00000509407 ENSP00000423483
ENST00000512317 ENSP00000423448
ENST00000541496 ENSP00000445678
ENST00000535835 ENSP00000438188
ENST00000543631 ENSP00000444832
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
Biological Process
GO:0007165 signal transduction
Cellular Component
GO:0005578 proteinaceous extracellular matrix
GO:0005615 extracellular space
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000029309
View Gene Order
ENSBTAG00000004094
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.593087 Hs.62886 Hs.740129
RefSeq NM_001128310 NM_001291976 NM_004684
HUGO
OMIM
CCDS CCDS3622
HPRD 06919
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca