Version 5.4
Homo sapiens Gene: SRRT
Summary
InnateDB Gene IDBG-32276.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SRRT
Gene Name serrate RNA effector molecule homolog (Arabidopsis)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000087087
Encoded Proteins
IDBP-384024
serrate RNA effector molecule homolog (Arabidopsis)
IDBP-384027
serrate RNA effector molecule homolog (Arabidopsis)
IDBP-384028
serrate RNA effector molecule homolog (Arabidopsis)
IDBP-384031
serrate RNA effector molecule homolog (Arabidopsis)
IDBP-384034
serrate RNA effector molecule homolog (Arabidopsis)
IDBP-810661
serrate, RNA effector molecule
IDBP-810666
serrate, RNA effector molecule
IDBP-810670
serrate, RNA effector molecule
IDBP-810671
serrate, RNA effector molecule
IDBP-810672
serrate, RNA effector molecule
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 7:100875111-100888664
Strand Forward strand
Band q22.1
Transcripts
ENST00000431645 ENSP00000400912
ENST00000423692 ENSP00000396807
ENST00000448764 ENSP00000410588
ENST00000449389 ENSP00000400703
ENST00000445337 ENSP00000398618
ENST00000474896
ENST00000460194
ENST00000466432
ENST00000487311
ENST00000469602
ENST00000478693
ENST00000477529
ENST00000620394
ENST00000618262 ENSP00000478341
ENST00000614484 ENSP00000481173
ENST00000614370 ENSP00000483348
ENST00000618411 ENSP00000483556
ENST00000611405 ENSP00000480421
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 49 experimentally validated interaction(s) in this database.
Experimentally validated
Total 49 [view]
Protein-Protein 48 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0008283 cell proliferation
GO:0031053 primary miRNA processing
GO:0046685 response to arsenic-containing substance
GO:0097150 neuronal stem cell maintenance
Cellular Component
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000037364
View Gene Order
ENSBTAG00000001134
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.111801
RefSeq NM_001128852 NM_001128853 NM_001128854 NM_015908 XM_005250405 XM_005250406 XM_005250407 XM_005250408
HUGO
OMIM
CCDS CCDS34709 CCDS47665 CCDS47666 CCDS47667
HPRD 10665
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca