Version 5.4
Homo sapiens Gene: GABARAPL2
Summary
InnateDB Gene IDBG-42625.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GABARAPL2
Gene Name GABA(A) receptor-associated protein-like 2
Synonyms ATG8; ATG8C; GATE-16; GATE16; GEF-2; GEF2
Species Homo sapiens
Ensembl Gene ENSG00000034713
Encoded Proteins
IDBP-42627
GABA(A) receptor-associated protein-like 2
IDBP-751461
IDBP-751757
IDBP-754254
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 16:75566351-75577881
Strand Forward strand
Band q23.1
Transcripts
ENST00000037243 ENSP00000037243
ENST00000563744 ENSP00000457448
ENST00000565985
ENST00000565057 ENSP00000456773
ENST00000568455 ENSP00000455606
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 90 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 90 [view]
Protein-Protein 90 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000149 SNARE binding
GO:0005515 protein binding
GO:0008017 microtubule binding
GO:0048487 beta-tubulin binding
GO:0050811 GABA receptor binding
GO:0051117 ATPase binding
Biological Process
GO:0000045 autophagic vacuole assembly
GO:0006891 intra-Golgi vesicle-mediated transport
GO:0006914 autophagy
GO:0015031 protein transport
GO:0032781 positive regulation of ATPase activity
GO:1901799 negative regulation of proteasomal protein catabolic process
Cellular Component
GO:0000139 Golgi membrane
GO:0000421 autophagic vacuole membrane
GO:0005622 intracellular
GO:0005737 cytoplasm
GO:0005776 autophagic vacuole
GO:0005794 Golgi apparatus
GO:0005829 cytosol
GO:0031410 cytoplasmic vesicle
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000031950
View Gene Order
ENSBTAG00000006550
Not yet available
Pathways
NETPATH
REACTOME
KEGG
hsa04140
Regulation of autophagy pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.461379 Hs.659651
RefSeq NM_007285
HUGO
OMIM
CCDS CCDS10921
HPRD 16246
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca