Version 5.4
Homo sapiens Gene: TRMT6
Summary
InnateDB Gene IDBG-51859.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TRMT6
Gene Name tRNA methyltransferase 6 homolog (S. cerevisiae)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000089195
Encoded Proteins
IDBP-51863
tRNA methyltransferase 6 homolog (S. cerevisiae)
IDBP-365312
tRNA methyltransferase 6 homolog (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary The protein encoded by this gene is similar to an uncharacterized protein from C. elegans. Although the function of the encoded protein is unknown, it shares weak sequence similarity to a region of S. cerevisiae translation initiation factor subunit Gcd10p. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 20:5937235-5950558
Strand Reverse strand
Band p12.3
Transcripts
ENST00000203001 ENSP00000203001
ENST00000453074 ENSP00000392070
ENST00000473131
ENST00000466974
ENST00000493972
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 12 experimentally validated interaction(s) in this database.
Experimentally validated
Total 12 [view]
Protein-Protein 11 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003743 translation initiation factor activity
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006413 translational initiation
GO:0006446 regulation of translational initiation
GO:0008033 tRNA processing
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000037376
View Gene Order
ENSBTAG00000001314
Not yet available
Cross-References
SwissProt Q9UJA5
TrEMBL
UniProt Splice Variant
Entrez Gene 51605
UniGene Hs.128791
RefSeq NM_001281467 NM_015939
HUGO HGNC:20900
OMIM
CCDS CCDS13093 CCDS63225
HPRD
IMGT
EMBL AB032979 AF132943 AK000613 AK300812 AL035461 BC001262
GenPept AAD27718 AAH01262 BAA86467 BAG62468 CAB55274
RNA Seq Atlas 51605

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca