Version 5.4
Bos taurus Gene: LY9
Summary
InnateDB Gene IDBG-630402.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LY9
Gene Name T-lymphocyte surface antigen Ly-9
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000002947
Encoded Proteins
IDBP-681851
T-lymphocyte surface antigen Ly-9
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
InnateDB Annotation from Orthologs
Summary
PMID 18501771
[Homo sapiens] LY9 (SLAMF3) is part of the SLAM and SAP gene families that control innate and adaptive immune responses.
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000122224:
LY9 belongs to the SLAM family of immunomodulatory receptors (see SLAMF1; MIM 603492) and interacts with the adaptor molecule SAP (SH2D1A; MIM 300490) (Graham et al., 2006 [PubMed 16365421]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:8836998-8864398
Strand Reverse strand
Band
Transcripts
ENSBTAT00000003840 ENSBTAP00000003840
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004872 receptor activity
GO:0005515 protein binding
Biological Process
Cellular Component
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000122224
View Gene Order
ENSMUSG00000004707
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
NetPath_11
TCR pathway
REACTOME
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL Q148K3
UniProt Splice Variant
Entrez Gene 528926
UniGene Bt.28439
RefSeq NM_001075918
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BC118207 DAAA02006974
GenPept AAI18208
RNA Seq Atlas 528926

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca