Version 5.4
Bos taurus Gene: TRIM71
Summary
InnateDB Gene IDBG-644120.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TRIM71
Gene Name Uncharacterized protein
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000022744
Encoded Proteins
IDBP-696732
tripartite motif containing 71
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
InnateDB Annotation from Orthologs
Summary
PMID 23438823
[Homo sapiens] TRIM71 was identified in a systematic screen for positive regulators of innate immune responses.
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000206557:
Gene Information
Type Protein coding
Genomic Location Chromosome 22:7281419-7341846
Strand Forward strand
Band
Transcripts
ENSBTAT00000030874 ENSBTAP00000030842
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0004842 ubiquitin-protein transferase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0016874 ligase activity
GO:0035198 miRNA binding
GO:0046872 metal ion binding
Biological Process
GO:0000082 G1/S transition of mitotic cell cycle
GO:0001843 neural tube closure
GO:0007275 multicellular organismal development
GO:0008543 fibroblast growth factor receptor signaling pathway
GO:0010586 miRNA metabolic process
GO:0016567 protein ubiquitination
GO:0021915 neural tube development
GO:0031047 gene silencing by RNA
GO:0035278 negative regulation of translation involved in gene silencing by miRNA
GO:0051246 regulation of protein metabolic process
GO:0051865 protein autoubiquitination
GO:0060964 regulation of gene silencing by miRNA
GO:0071310 cellular response to organic substance
GO:0072089 stem cell proliferation
GO:2000177 regulation of neural precursor cell proliferation
GO:2000637 positive regulation of gene silencing by miRNA
Cellular Component
GO:0000932 cytoplasmic mRNA processing body
GO:0005622 intracellular
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000206557
View Gene Order
ENSMUSG00000079259
View Gene Order
Cross-References
SwissProt E1BJS7
TrEMBL
UniProt Splice Variant
Entrez Gene 531886
UniGene
RefSeq XM_002707777
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02053578 HQ826939
GenPept ADZ53892
RNA Seq Atlas 531886

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca