Version 5.4
Bos taurus Gene: LIMD1
Summary
InnateDB Gene IDBG-646275.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LIMD1
Gene Name LIM domain-containing protein 1
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000026097
Encoded Proteins
IDBP-699061
LIM domains containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000144791:
Gene Information
Type Protein coding
Genomic Location Chromosome 22:54259648-54337446
Strand Reverse strand
Band
Transcripts
ENSBTAT00000037007 ENSBTAP00000036851
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 12 interaction(s) predicted by orthology.
Predicted by orthology
Total 12 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003714 transcription corepressor activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0001666 response to hypoxia
GO:0002076 osteoblast development
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0007010 cytoskeleton organization
GO:0008360 regulation of cell shape
GO:0016310 phosphorylation
GO:0016477 cell migration
GO:0031047 gene silencing by RNA
GO:0033962 cytoplasmic mRNA processing body assembly
GO:0035195 gene silencing by miRNA
GO:0035331 negative regulation of hippo signaling
GO:0045668 negative regulation of osteoblast differentiation
GO:0045892 negative regulation of transcription, DNA-templated
GO:0090090 negative regulation of canonical Wnt signaling pathway
GO:2000637 positive regulation of gene silencing by miRNA
Cellular Component
GO:0000932 cytoplasmic mRNA processing body
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005912 adherens junction
GO:0005925 focal adhesion
GO:0016442 RISC complex
GO:0030054 cell junction
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000144791
View Gene Order
ENSMUSG00000025239
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
NetPath_4
EGFR1 pathway
REACTOME
KEGG
INOH
PID NCI
Cross-References
SwissProt G5E5X0
TrEMBL
UniProt Splice Variant
Entrez Gene 617525
UniGene Bt.43695
RefSeq NM_001193163
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02054514 DAAA02054515 DAAA02054516 DAAA02054517 DAAA02054518
GenPept
RNA Seq Atlas 617525

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca