Version 5.4
Bos taurus Gene: H1F0
Summary
InnateDB Gene IDBG-648421.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol H1F0
Gene Name Histone H1.0
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000038439
Encoded Proteins
IDBP-701169
Histone H1.0
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000189060:
Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Nucleosomes consist of approximately 146 bp of DNA wrapped around a histone octamer composed of pairs of each of the four core histones (H2A, H2B, H3, and H4). The chromatin fiber is further compacted through the interaction of a linker histone, H1, with the DNA between the nucleosomes to form higher order chromatin structures. This gene is intronless and encodes a member of the histone H1 family. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:110122673-110124878
Strand Forward strand
Band
Transcripts
ENSBTAT00000051866 ENSBTAP00000049194
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 20 interaction(s) predicted by orthology.
Predicted by orthology
Total 20 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0031490 chromatin DNA binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006334 nucleosome assembly
Cellular Component
GO:0000786 nucleosome
GO:0000790 nuclear chromatin
GO:0005634 nucleus
GO:0005694 chromosome
GO:0005719 nuclear euchromatin
GO:0005794 Golgi apparatus
GO:0015629 actin cytoskeleton
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000189060
View Gene Order
ENSMUSG00000096210
View Gene Order
Pathways
NETPATH
REACTOME
REACT_215546
Apoptosis induced DNA fragmentation pathway
REACT_206069
Cellular responses to stress pathway
REACT_226255
Activation of DNA fragmentation factor pathway
REACT_215025
Cellular Senescence pathway
REACT_227007
Apoptotic execution phase pathway
REACT_211071
Formation of Senescence-Associated Heterochromatin Foci (SAHF) pathway
REACT_214732
DNA Damage/Telomere Stress Induced Senescence pathway
REACT_219454
Apoptosis pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_13462
Activation of DNA fragmentation factor pathway
REACT_995
Apoptotic execution phase pathway
REACT_120956
Cellular responses to stress pathway
REACT_1213
Apoptosis induced DNA fragmentation pathway
REACT_169121
Formation of Senescence-Associated Heterochromatin Foci (SAHF) pathway
REACT_578
Apoptosis pathway
REACT_169185
DNA Damage/Telomere Stress Induced Senescence pathway
REACT_169274
Cellular Senescence pathway
REACT_258521
Apoptosis pathway
REACT_188957
Cellular responses to stress pathway
REACT_215449
Apoptosis induced DNA fragmentation pathway
REACT_188819
DNA Damage/Telomere Stress Induced Senescence pathway
REACT_205002
Activation of DNA fragmentation factor pathway
REACT_188820
Cellular Senescence pathway
REACT_209428
Formation of Senescence-Associated Heterochromatin Foci (SAHF) pathway
REACT_207035
Apoptotic execution phase pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Bt.74176
RefSeq NM_001076487
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas
Transcript Frequencies
Tag Count based mRNA-Abundances across 87 different Tissues (TPM).

Based on Data from Bovine Gene Atlas

Tag Count based mRNA-Abundances across 87 different Tissues (TPM)

(Move your mouse over the image to view a more detailed version)

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca