Version 5.4
Homo sapiens Gene: USP54
Summary
InnateDB Gene IDBG-78529.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol USP54
Gene Name ubiquitin specific peptidase 54
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000166348
Encoded Proteins
IDBP-78531
ubiquitin specific peptidase 54
IDBP-295486
ubiquitin specific peptidase 54
IDBP-379895
ubiquitin specific peptidase 54
IDBP-379896
ubiquitin specific peptidase 54
IDBP-379902
ubiquitin specific peptidase 54
IDBP-379908
ubiquitin specific peptidase 54
IDBP-379912
ubiquitin specific peptidase 54
IDBP-379914
ubiquitin specific peptidase 54
IDBP-812538
ubiquitin specific peptidase 54
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 10:73497538-73625953
Strand Reverse strand
Band q22.2
Transcripts
ENST00000339859 ENSP00000345216
ENST00000408019 ENSP00000386080
ENST00000424265 ENSP00000399972
ENST00000418501 ENSP00000404644
ENST00000422491 ENSP00000407368
ENST00000451492 ENSP00000402435
ENST00000413442 ENSP00000404710
ENST00000433394 ENSP00000407245
ENST00000466048 ENSP00000473466
ENST00000497106
ENST00000464635
ENST00000498143
ENST00000480210
ENST00000461520
ENST00000492357
ENST00000481991
ENST00000498213
ENST00000474929
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 20 experimentally validated interaction(s) in this database.
Experimentally validated
Total 20 [view]
Protein-Protein 20 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0036459 ubiquitinyl hydrolase activity
Biological Process
GO:0006511 ubiquitin-dependent protein catabolic process
Cellular Component
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000034235
View Gene Order
ENSBTAG00000011108
Not yet available
Cross-References
SwissProt Q70EL1
TrEMBL E7EW90 X6RGF2 X6RH50 X6RHN7
UniProt Splice Variant
Entrez Gene 159195
UniGene Hs.657355 Hs.712514
RefSeq NM_152586
HUGO HGNC:23513
OMIM
CCDS CCDS7329
HPRD
IMGT
EMBL AC073389 AJ583820 AK094637 AK123711 AK126497 AK127213 AK127267 AL359074 BC064967 BC130633 BX649087
GenPept AAH64967 AAI30634 BAC04393 BAC86566 BAC86886 BAC86907 BAG53943 CAE47747 CAO03506 CAO03507 CAO03508 CAO03509
RNA Seq Atlas 159195

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca