InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Rfc5

Summary

InnateDB Protein

IDBP-194885.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Rfc5

Protein Name

replication factor C (activator 1) 5

Synonyms

2610020K06Rik; 2610209F07Rik; 36.5kDa; 36kDa; Recc5;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000083652

InnateDB Gene

IDBG-194883 (Rfc5)

Protein Structure

UniProt Annotation

Function

The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1.

Subcellular Localization

Nucleus {ECO:0000305}.

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 40 interaction(s) predicted by orthology.

Experimentally validated
Total	4 [view]
Protein-Protein	4 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	40 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000166	nucleotide binding
GO:0003677	DNA binding
GO:0005515	protein binding
GO:0005524	ATP binding
GO:0009378	four-way junction helicase activity
GO:0017111	nucleoside-triphosphatase activity

Biological Process

GO:0006260	DNA replication
GO:0006281	DNA repair
GO:0006310	DNA recombination

Cellular Component

GO:0005634	nucleus
GO:0005663	DNA replication factor C complex

Protein Structure and Domains

PDB ID

MGI:1919401

InterPro

IPR003593 AAA+ ATPase domain
IPR003959 ATPase, AAA-type, core
IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR013748 Replication factor C, C-terminal domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase

PFAM

PF00004
PF07724
PF13304
PF05496
PF08542

PRINTS

PIRSF

SMART

SM00382

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

Q9D0F6