InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Smarcc2

Summary

InnateDB Protein

IDBP-197554.5

Last Modified

2012-02-14 [Report errors or provide feedback]

Gene Symbol

Smarcc2

Protein Name

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2

Synonyms

5930405J04Rik;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000096734

InnateDB Gene

IDBG-197552 (Smarcc2)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 26 experimentally validated interaction(s) in this database.
They are also associated with 105 interaction(s) predicted by orthology.

Experimentally validated
Total	26 [view]
Protein-Protein	23 [view]
Protein-DNA	1 [view]
Protein-RNA	0
DNA-DNA	2 [view]
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	105 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003677	DNA binding
GO:0003682	chromatin binding
GO:0005515	protein binding

Biological Process

GO:0000122	negative regulation of transcription from RNA polymerase II promoter
GO:0021882	regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment

Cellular Component

GO:0016514

SWI/SNF complex

Protein Structure and Domains

PDB ID

MGI:1915344

InterPro

IPR000953 Chromo domain/shadow
IPR001005 SANT/Myb domain
IPR001357 BRCT domain
IPR007526 SWIRM domain
IPR009057 Homeodomain-like
IPR017877 Myb-like domain

PFAM

PF00249
PF00533
PF12738
PF04433

PRINTS

PIRSF

SMART

SM00298
SM00717
SM00292

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite