Mus musculus Protein: Sema6d
Summary
InnateDB Protein IDBP-203265.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sema6d
Protein Name sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000077691
InnateDB Gene IDBG-203251 (Sema6d)
Protein Structure
UniProt Annotation
Function Shows growth cone collapsing activity on dorsal root ganglion (DRG) neurons in vitro. May be a stop signal for the DRG neurons in their target areas, and possibly also for other neurons. May also be involved in the maintenance and remodeling of neuronal connections (By similarity). {ECO:0000250}.
Subcellular Localization Cell membrane {ECO:0000250}; Single-pass type I membrane protein {ECO:0000250}.
Disease Associations
Tissue Specificity Expressed in brain and lung. {ECO:0000269PubMed:14715272}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0004872 receptor activity
GO:0005515 protein binding
GO:0030215 semaphorin receptor binding
Biological Process
GO:0007275 multicellular organismal development
GO:0014911 positive regulation of smooth muscle cell migration
GO:0014912 negative regulation of smooth muscle cell migration
GO:0021591 ventricular system development
GO:0030154 cell differentiation
Cellular Component
GO:0005794 Golgi apparatus
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
Protein Structure and Domains
PDB ID MGI:2387661
InterPro IPR001627 Sema domain
IPR002165 Plexin
IPR016201 Plexin-like fold
PFAM PF01403
PF01437
PRINTS
PIRSF
SMART SM00630
SM00423
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q76KF0
PhosphoSite PhosphoSite-Q76KF0
TrEMBL
UniProt Splice Variant
Entrez Gene 214968
UniGene Mm.473513
RefSeq NP_954709
MGI ID
MGI Symbol Sema6d
OMIM
CCDS CCDS38225
HPRD
IMGT
EMBL AB091532 AB091533 AB091534 AB091535 AB091536 AK122515 AL935323 BC060680
GenPept AAH60680 BAC65797 BAD05168 BAD05169 BAD05170 BAD05171 BAD05172 CAM20227