Version 5.4
Mus musculus Protein: Utp6
Summary
InnateDB Protein IDBP-203717.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Utp6
Protein Name UTP6, small subunit (SSU) processome component, homolog (yeast)
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000046643
InnateDB Gene IDBG-203715 (Utp6)
Protein Structure
UniProt Annotation
Function Involved in nucleolar processing of pre-18S ribosomal RNA. {ECO:0000250}.
Subcellular Localization Nucleus, nucleolus {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0006364 rRNA processing
GO:0006396 RNA processing
Cellular Component
GO:0005622 intracellular
GO:0005730 nucleolus
Protein Structure and Domains
PDB ID MGI:2445193
InterPro IPR003107 RNA-processing protein, HAT helix
IPR013949 U3 small nucleolar RNA-associated protein 6
PFAM PF02184
PF08640
PRINTS
PIRSF
SMART SM00386
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q8VCY6
PhosphoSite PhosphoSite-Q8VCY6
TrEMBL Q8R187
UniProt Splice Variant
Entrez Gene 216987
UniGene Mm.274961
RefSeq NP_659075
MGI ID
MGI Symbol Utp6
OMIM
CCDS CCDS25124
HPRD
IMGT
EMBL AF334387 AK029151 AK084976 AK169785 AL591113 BC018250 BC023920 BC024850 BC025074
GenPept AAH18250 AAH23920 AAH24850 AAH25074 AAO15383 BAC26328 BAC39327 BAE41364 CAI24760

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca