Version 5.4
Mus musculus Protein: Atxn2l
Summary
InnateDB Protein IDBP-209555.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Atxn2l
Protein Name ataxin 2-like
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000035415
InnateDB Gene IDBG-209553 (Atxn2l)
Protein Structure
UniProt Annotation
Function
Subcellular Localization Membrane {ECO:0000250}; Peripheral membrane protein {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 24 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 24 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0010603 regulation of cytoplasmic mRNA processing body assembly
GO:0034063 stress granule assembly
Cellular Component
GO:0005737 cytoplasm
GO:0010494 cytoplasmic stress granule
GO:0016020 membrane
GO:0016607 nuclear speck
Protein Structure and Domains
PDB ID MGI:2446242
InterPro IPR009604 LsmAD domain
IPR009818 Ataxin-2, C-terminal
IPR010920 Like-Sm (LSM) domain
PFAM PF06741
PF07145
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q7TQH0
PhosphoSite PhosphoSite-Q7TQH0
TrEMBL E9Q5Q0
UniProt Splice Variant
Entrez Gene 233871
UniGene Mm.397595
RefSeq NP_898841
MGI ID
MGI Symbol Atxn2l
OMIM
CCDS CCDS21831
HPRD
IMGT
EMBL AC125322 BC034083 BC043451 BC054483
GenPept AAH34083 AAH43451 AAH54483

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca