Version 5.4
Homo sapiens Protein: ABLIM1
Summary
InnateDB Protein IDBP-244578.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ABLIM1
Protein Name actin binding LIM protein 1
Synonyms ABLIM; abLIM-1; LIMAB1; LIMATIN;
Species Homo sapiens
Ensembl Protein ENSP00000376679
InnateDB Gene IDBG-90406 (ABLIM1)
Protein Structure
UniProt Annotation
Function May act as scaffold protein (By similarity). May play a role in the development of the retina. Has been suggested to play a role in axon guidance. {ECO:0000250, ECO:0000269PubMed:9245787}.
Subcellular Localization Cytoplasm {ECO:0000250}. Cytoplasm, cytoskeleton {ECO:0000250}. Note=Associated with the cytoskeleton. {ECO:0000250}.
Disease Associations
Tissue Specificity Detected in liver, heart, skeletal muscle, brain and retina, where it is concentrated in the inner segment and in the outer plexiform layers. {ECO:0000269PubMed:9245787}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 24 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 24 [view]
Protein-Protein 23 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003779 actin binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
Biological Process
GO:0007010 cytoskeleton organization
GO:0007411 axon guidance
GO:0007601 visual perception
GO:0009887 organ morphogenesis
Cellular Component
GO:0005737 cytoplasm
Protein Structure and Domains
PDB ID
InterPro IPR003128 Villin headpiece
PFAM PF02209
PRINTS
PIRSF
SMART SM00153
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt O14639
PhosphoSite PhosphoSite-O14639
TrEMBL
UniProt Splice Variant
Entrez Gene 3983
UniGene Hs.645719
RefSeq NP_006711
HUGO HGNC:78
OMIM 602330
CCDS CCDS31289
HPRD 03819
IMGT
EMBL AF005654 AK098277 AL133384 AL354873 AL590109 BC002448 CR749819 D31883
GenPept AAC51676 AAH02448 BAA06681 BAG53605 CAH18679 CAI10908 CAI10910 CAI40135 CAI40136 CAI40140 CAI40141

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca