Version 5.4
Homo sapiens Protein: COL23A1
Summary
InnateDB Protein IDBP-294750.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol COL23A1
Protein Name collagen, type XXIII, alpha 1
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000385092
InnateDB Gene IDBG-60968 (COL23A1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization Cell membrane {ECO:0000250}; Single-pass type II membrane protein {ECO:0000250}; Extracellular side {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0022617 extracellular matrix disassembly
GO:0030198 extracellular matrix organization
GO:0030574 collagen catabolic process
Cellular Component
GO:0005581 collagen trimer
GO:0005788 endoplasmic reticulum lumen
GO:0005886 plasma membrane
GO:0016021 integral component of membrane
Protein Structure and Domains
PDB ID
InterPro IPR008160 Collagen triple helix repeat
PFAM PF01391
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q86Y22
PhosphoSite PhosphoSite-Q86Y22
TrEMBL
UniProt Splice Variant
Entrez Gene 91522
UniGene Hs.660026
RefSeq
HUGO HGNC:22990
OMIM 610043
CCDS
HPRD 16733
IMGT
EMBL AL137461 AY158895 AY898961 BC042428
GenPept AAH42428 AAO18361 AAX84028 CAB70749

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca