Version 5.4
Homo sapiens Protein: PRDM16
Summary
InnateDB Protein IDBP-483255.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PRDM16
Protein Name PR domain containing 16
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000426975
InnateDB Gene IDBG-86547 (PRDM16)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 5 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
Cellular Component
Protein Structure and Domains
PDB ID
InterPro IPR001214 SET domain
IPR003656 Zinc finger, BED-type
IPR007087 Zinc finger, C2H2
IPR015880 Zinc finger, C2H2-like
PFAM PF00856
PF02892
PF00096
PRINTS
PIRSF
SMART SM00317
SM00614
SM00355
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL D6RDW0
UniProt Splice Variant
Entrez Gene 63976
UniGene Hs.99500
RefSeq XP_005244831
HUGO HGNC:14000
OMIM 605557
CCDS
HPRD 16122
IMGT
EMBL AL008733 AL354743 AL512383 AL590438
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca