Version 5.4
Mus musculus Protein: Dkc1
Summary
InnateDB Protein IDBP-532455.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Dkc1
Protein Name dyskeratosis congenita 1, dyskerin homolog (human)
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000121253
InnateDB Gene IDBG-156751 (Dkc1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 10 experimentally validated interaction(s) in this database.
They are also associated with 35 interaction(s) predicted by orthology.
Experimentally validated
Total 10 [view]
Protein-Protein 10 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 35 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0004730 pseudouridylate synthase activity
GO:0009982 pseudouridine synthase activity
GO:0030519 snoRNP binding
Biological Process
GO:0000154 rRNA modification
GO:0001522 pseudouridine synthesis
GO:0006396 RNA processing
GO:0009451 RNA modification
Cellular Component
GO:0005730 nucleolus
Protein Structure and Domains
PDB ID MGI:1861727
InterPro IPR020103 Pseudouridine synthase, catalytic domain
PFAM
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL F6S1S5
UniProt Splice Variant
Entrez Gene 245474
UniGene Mm.291062
RefSeq
MGI ID
MGI Symbol Dkc1
OMIM
CCDS
HPRD
IMGT
EMBL AL808110
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca