Version 5.4
Homo sapiens Protein: USB1
Summary
InnateDB Protein IDBP-595945.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol USB1
Protein Name chromosome 16 open reading frame 57
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000446143
InnateDB Gene IDBG-34027 (USB1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000175 3'-5'-exoribonuclease activity
GO:0004518 nuclease activity
Biological Process
GO:0006397 mRNA processing
GO:0008380 RNA splicing
GO:0034477 U6 snRNA 3'-end processing
GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID
InterPro IPR027521 U6 snRNA phosphodiesterase Usb1
PFAM PF09749
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9BQ65
PhosphoSite PhosphoSite-Q9BQ65
TrEMBL
UniProt Splice Variant
Entrez Gene 79650
UniGene Hs.721189
RefSeq NP_001182231
HUGO HGNC:25792
OMIM 613276
CCDS CCDS55998
HPRD 07815
IMGT
EMBL AC010543 AC012182 AK023216 AK301494 AK303121 BC004415 BC006291 BC007774 BC010099 BC021554
GenPept AAH04415 AAH06291 AAH07774 AAH10099 AAH21554 BAB14469 BAG63005 BAG64227

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca