Version 5.4
Homo sapiens Protein: SCAND1
Summary
InnateDB Protein IDBP-71952.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SCAND1
Protein Name SCAN domain containing 1
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000301995
InnateDB Gene IDBG-71948 (SCAND1)
Protein Structure
UniProt Annotation
Function May regulate transcriptional activity.
Subcellular Localization Nucleus {ECO:0000255PROSITE- ProRule:PRU00187}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 22 experimentally validated interaction(s) in this database.
Experimentally validated
Total 22 [view]
Protein-Protein 21 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000981 sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0003713 transcription coactivator activity
GO:0042802 identical protein binding
Biological Process
GO:0006355 regulation of transcription, DNA-templated
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0006366 transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID
InterPro IPR003309 Transcription regulator SCAN
IPR008916 Retrovirus capsid, C-terminal
PFAM PF02023
PRINTS
PIRSF
SMART SM00431
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt P57086
PhosphoSite PhosphoSite-P57086
TrEMBL Q9NZG6
UniProt Splice Variant
Entrez Gene 51282
UniGene Hs.584909
RefSeq NP_361012
HUGO HGNC:10566
OMIM 610416
CCDS CCDS13269
HPRD 15298
IMGT
EMBL AF204271 AF207829 AL109965 BC000785 BC036709 BC041022 CH471077 CR457188
GenPept AAF59839 AAF66832 AAH00785 AAH36709 AAH41022 CAC09390 CAG33469 EAW76150 EAW76151 EAW76152

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca