InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Protein: COL12A1

Summary

InnateDB Protein

IDBP-813637.1

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

COL12A1

Protein Name

collagen, type XII, alpha 1

Synonyms

BA209D8.1; COL12A1L; DJ234P15.1;

Species

Homo sapiens

Ensembl Protein

ENSP00000481931

InnateDB Gene

IDBG-92641 (COL12A1)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.

Experimentally validated
Total	2 [view]
Protein-Protein	2 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005515	protein binding
GO:0030020	extracellular matrix structural constituent conferring tensile strength

Biological Process

GO:0001501	skeletal system development
GO:0007155	cell adhesion
GO:0022617	extracellular matrix disassembly
GO:0030198	extracellular matrix organization
GO:0030199	collagen fibril organization
GO:0030574	collagen catabolic process

Cellular Component

GO:0005576	extracellular region
GO:0005595	collagen type XII trimer
GO:0005615	extracellular space
GO:0005788	endoplasmic reticulum lumen
GO:0031012	extracellular matrix
GO:0070062	extracellular vesicular exosome

Protein Structure and Domains

PDB ID

InterPro

IPR001791 Laminin G domain
IPR002035 von Willebrand factor, type A
IPR003961 Fibronectin, type III
IPR008160 Collagen triple helix repeat
IPR008985 Concanavalin A-like lectin/glucanases superfamily

PFAM

PF00054
PF02210
PF00092
PF00041
PF01108
PF01391

PRINTS

PIRSF

SMART

SM00210
SM00282
SM00327
SM00060

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite