InnateDB Protein
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IDBP-81942.7
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Last Modified
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2014-10-13 [Report errors or provide feedback]
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Gene Symbol
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COL4A6
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Protein Name
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collagen, type IV, alpha 6
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Synonyms
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CXDELq22.3; DELXq22.3; DFNX6;
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Species
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Homo sapiens
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Ensembl Protein
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ENSP00000334733
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InnateDB Gene
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IDBG-81938 (COL4A6)
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Protein Structure
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Function |
Type IV collagen is the major structural component of glomerular basement membranes (GBM), forming a 'chicken-wire' meshwork together with laminins, proteoglycans and entactin/nidogen.
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Subcellular Localization |
Secreted, extracellular space, extracellular matrix, basement membrane.
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Disease Associations |
Note=Deletions covering the N-terminal regions of COL4A5 and COL4A6, which are localized in a head-to-head manner, are found in the chromosome Xq22.3 centromeric deletion syndrome. This results in a phenotype with features of diffuse leiomyomatosis and Alport syndrome (DL-ATS).Deafness, X-linked, 6 (DFNX6) [MIM:300914]: A non- syndromic form of sensorineural hearing loss with prelingual onset. Sensorineural deafness results from damage to the neural receptors of the inner ear, the nerve pathways to the brain, or the area of the brain that receives sound information. {ECO:0000269PubMed:23714752}. Note=The disease is caused by mutations affecting the gene represented in this entry.
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Tissue Specificity |
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Comments |
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Number of Interactions
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This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
Experimentally validated |
Total |
4
[view]
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Protein-Protein |
4
[view]
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Protein-DNA |
0
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Protein-RNA |
0
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DNA-DNA |
0
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RNA-RNA |
0
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DNA-RNA |
0
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Molecular Function |
Accession |
GO Term |
GO:0005201
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extracellular matrix structural constituent
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Biological Process |
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Cellular Component |
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PDB ID |
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InterPro |
IPR001442
Collagen IV, non-collagenous
IPR008160
Collagen triple helix repeat
IPR016187
C-type lectin fold
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PFAM |
PF01413
PF01391
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PRINTS |
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PIRSF |
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SMART |
SM00111
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TIGRFAMs |
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Modification |
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SwissProt |
Q14031
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PhosphoSite |
PhosphoSite-Q14031
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TrEMBL |
B4DU54
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UniProt Splice Variant |
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Entrez Gene |
1288
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UniGene |
Hs.592785
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RefSeq |
NP_378667
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HUGO |
HGNC:2208
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OMIM |
303631
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CCDS |
CCDS14542
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HPRD |
02364
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IMGT |
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EMBL |
AK300502
AL031177
AL034369
AL109943
AL136080
CH471120
D21337
L22763
U04845
U46959
U46960
U46961
U46962
U46963
U46964
U46965
U46966
U46967
U46968
U46969
U46970
U46971
U46972
U46973
U46974
U46975
U46976
U46977
U46978
U46979
U46980
U46981
U46982
U46983
U46984
U46985
U46986
U46987
U46988
U46989
U46990
U46991
U46992
U46993
U46994
U46995
U46996
U46997
U46998
U46999
U47000
U47001
U47002
U47003
U47004
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GenPept |
AAA16338
AAA19569
AAB19038
AAB19039
BAA04809
BAG62216
CAI40756
CAI40758
CAI42045
CAI42047
CAI42993
CAI42995
CAI43139
CAI43140
EAX02688
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