Version 5.4
Homo sapiens Gene: C1orf85
Summary
InnateDB Gene IDBG-103459.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol C1orf85
Gene Name chromosome 1 open reading frame 85
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000198715
Encoded Proteins
IDBP-103461
chromosome 1 open reading frame 85
IDBP-103465
chromosome 1 open reading frame 85
IDBP-813609
chromosome 1 open reading frame 85
IDBP-813611
chromosome 1 open reading frame 85
IDBP-813616
chromosome 1 open reading frame 85
IDBP-813617
chromosome 1 open reading frame 85
IDBP-813618
chromosome 1 open reading frame 85
IDBP-813619
chromosome 1 open reading frame 85
IDBP-813621
chromosome 1 open reading frame 85
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:156290089-156295689
Strand Reverse strand
Band q22
Transcripts
ENST00000362007 ENSP00000354553
ENST00000368264 ENSP00000357247
ENST00000461597 ENSP00000476260
ENST00000497831
ENST00000472870 ENSP00000477180
ENST00000480968
ENST00000482579
ENST00000481050 ENSP00000477187
ENST00000476177 ENSP00000477253
ENST00000497955
ENST00000479084
ENST00000484214
ENST00000622703 ENSP00000479149
ENST00000612353 ENSP00000483691
ENST00000614643 ENSP00000480936
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0004879 ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0030374 ligand-dependent nuclear receptor transcription coactivator activity
GO:0044212 transcription regulatory region DNA binding
Biological Process
GO:0030522 intracellular receptor signaling pathway
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
GO:0005764 lysosome
GO:0005765 lysosomal membrane
GO:0005829 cytosol
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000001418
View Gene Order
ENSBTAG00000006364
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.202522 Hs.743664
RefSeq NM_001256604 NM_001256605 NM_001256608 NM_001256609 NM_144580 XM_005244864
HUGO
OMIM
CCDS CCDS1139 CCDS72947 CCDS72948 CCDS72949
HPRD 14544
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca