Version 5.4
Homo sapiens Gene: ZNF213
Summary
InnateDB Gene IDBG-11618.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ZNF213
Gene Name zinc finger protein 213
Synonyms CR53; ZKSCAN21; ZSCAN53
Species Homo sapiens
Ensembl Gene ENSG00000085644
Encoded Proteins
IDBP-236591
zinc finger protein 213
IDBP-366360
zinc finger protein 213
IDBP-750103
IDBP-747614
IDBP-747281
IDBP-749665
IDBP-750651
IDBP-752231
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary C2H2 zinc finger proteins, such as ZNF213, have bipartite structures in which one domain binds DNA or RNA and the other modulates target gene expression.[supplied by OMIM, Apr 2004]
Gene Information
Type Protein coding
Genomic Location Chromosome 16:3129777-3142805
Strand Forward strand
Band p13.3
Transcripts
ENST00000396878 ENSP00000380087
ENST00000416391 ENSP00000403892
ENST00000574928
ENST00000576863 ENSP00000461024
ENST00000574902 ENSP00000460157
ENST00000574575 ENSP00000459293
ENST00000573771 ENSP00000459967
ENST00000576416 ENSP00000459177
ENST00000572647 ENSP00000459233
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000071256
View Gene Order
ENSBTAG00000026408
Not yet available
Pathways
NETPATH
REACTOME
REACT_12627
Generic Transcription Pathway pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.115284
RefSeq NM_001134655 NM_004220 XM_006720942
HUGO
OMIM
CCDS CCDS10495
HPRD 12224
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca