Version 5.4
Homo sapiens Gene: PCDH7
Summary
InnateDB Gene IDBG-12985.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PCDH7
Gene Name protocadherin 7
Synonyms BH-Pcdh; BHPCDH; PPP1R120
Species Homo sapiens
Ensembl Gene ENSG00000169851
Encoded Proteins
IDBP-12987
protocadherin 7
IDBP-485203
protocadherin 7
IDBP-810840
protocadherin 7
IDBP-595707
protocadherin 7
IDBP-810838
protocadherin 7
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene belongs to the protocadherin gene family, a subfamily of the cadherin superfamily. The gene encodes a protein with an extracellular domain containing 7 cadherin repeats. The gene product is an integral membrane protein that is thought to function in cell-cell recognition and adhesion. Alternative splicing yields isoforms with unique cytoplasmic tails. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 4:30720415-31146805
Strand Forward strand
Band p15.1
Transcripts
ENST00000361762 ENSP00000355243
ENST00000511884 ENSP00000427066
ENST00000507864
ENST00000509925
ENST00000509759 ENSP00000483285
ENST00000543491 ENSP00000441802
ENST00000621961 ENSP00000484874
ENST00000610830
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
Biological Process
GO:0007156 homophilic cell adhesion
Cellular Component
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0016020 membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000029108
View Gene Order
ENSBTAG00000000061
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.665959
RefSeq NM_001173523 NM_002589 NM_032456 NM_032457 XM_005248165
HUGO
OMIM
CCDS CCDS33971 CCDS75116
HPRD 04288
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca