Version 5.4
Mus musculus Gene: Xab2
Summary
InnateDB Gene IDBG-130120.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Xab2
Gene Name XPA binding protein 2
Synonyms 0610041O14Rik; AV025587
Species Mus musculus
Ensembl Gene ENSMUSG00000019470
Encoded Proteins
IDBP-130122
XPA binding protein 2
IDBP-535223
XPA binding protein 2
IDBP-537472
XPA binding protein 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000076924:
Gene Information
Type Protein coding
Genomic Location Chromosome 8:3608421-3621316
Strand Reverse strand
Band A1.1
Transcripts
ENSMUST00000019614 ENSMUSP00000019614
ENSMUST00000163038
ENSMUST00000159909
ENSMUST00000159548 ENSMUSP00000124202
ENSMUST00000159235 ENSMUSP00000124237
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 25 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 25 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0001824 blastocyst development
GO:0006283 transcription-coupled nucleotide-excision repair
GO:0006351 transcription, DNA-templated
GO:0006396 RNA processing
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005622 intracellular
GO:0016020 membrane
GO:0071013 catalytic step 2 spliceosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000076924
View Gene Order
ENSBTAG00000011360
Not yet available
Pathways
NETPATH
REACTOME
REACT_213655
Transcription-coupled NER (TC-NER) pathway
REACT_223654
Formation of transcription-coupled NER (TC-NER) repair complex pathway
REACT_235422
Nucleotide Excision Repair pathway
REACT_233397
DNA Repair pathway
REACT_224562
Dual incision reaction in TC-NER pathway
KEGG
mmu03040
Spliceosome pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_1941
Formation of transcription-coupled NER (TC-NER) repair complex pathway
REACT_2222
Dual incision reaction in TC-NER pathway
REACT_1628
Transcription-coupled NER (TC-NER) pathway
REACT_1826
Nucleotide Excision Repair pathway
REACT_216
DNA Repair pathway
KEGG
hsa03040
Spliceosome pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.23739 Mm.399588
RefSeq NM_026156 XM_006508864
OMIM
CCDS CCDS22065
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca