Version 5.4
Mus musculus Gene: Zfp397
Summary
InnateDB Gene IDBG-131344.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Zfp397
Gene Name zinc finger protein 397
Synonyms 2810411K16Rik; 6720480F11Rik; AI461664
Species Mus musculus
Ensembl Gene ENSMUSG00000024276
Encoded Proteins
IDBP-131346
zinc finger protein 397
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000186812:
This gene encodes a protein with a N-terminal SCAN domain, and the longer isoform contains nine C2H2-type zinc finger repeats in the C-terminal domain. The protein localizes to centromeres during interphase and early prophase, and different isoforms can repress or activate transcription in transfection studies. Multiple transcript variants encoding different isoforms have been found for this gene. Additional variants have been described, but their biological validity has not been determined. [provided by RefSeq, Oct 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 18:23954688-23964671
Strand Forward strand
Band A2
Transcripts
ENSMUST00000060762 ENSMUSP00000057253
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0003676 nucleic acid binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Gene ID
Gene Order
ENSG00000186812
View Gene Order
Cross-References
SwissProt
TrEMBL Q7TNK4
UniProt Splice Variant
Entrez Gene 69256
UniGene Mm.218343
RefSeq NM_027007 XM_006526223
OMIM
CCDS CCDS29096
HPRD
IMGT
MGI ID MGI:1916506
MGI Symbol Zfp397
EMBL AC126807 AY338468
GenPept AAQ15292
RNA Seq Atlas 69256

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca