Version 5.4
Mus musculus Gene: Sntg1
Summary
InnateDB Gene IDBG-132289.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sntg1
Gene Name syntrophin, gamma 1
Synonyms 4933426D16Rik; G1SYN; SYN4
Species Mus musculus
Ensembl Gene ENSMUSG00000025909
Encoded Proteins
IDBP-249526
syntrophin, gamma 1
IDBP-249528
syntrophin, gamma 1
IDBP-532683
syntrophin, gamma 1
IDBP-534901
syntrophin, gamma 1
IDBP-538408
syntrophin, gamma 1
IDBP-536758
syntrophin, gamma 1
IDBP-534206
syntrophin, gamma 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000147481:
The protein encoded by this gene is a member of the syntrophin family. Syntrophins are cytoplasmic peripheral membrane proteins that typically contain 2 pleckstrin homology (PH) domains, a PDZ domain that bisects the first PH domain, and a C-terminal domain that mediates dystrophin binding. This gene is specifically expressed in the brain. Transcript variants for this gene have been described, but their full-length nature has not been determined. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 1:8361475-9299878
Strand Reverse strand
Band A2
Transcripts
ENSMUST00000115488 ENSMUSP00000111151
ENSMUST00000115484 ENSMUSP00000111147
ENSMUST00000140295 ENSMUSP00000118101
ENSMUST00000132064 ENSMUSP00000122134
ENSMUST00000140302 ENSMUSP00000117397
ENSMUST00000135046 ENSMUSP00000119420
ENSMUST00000144593 ENSMUSP00000123632
ENSMUST00000134075
ENSMUST00000126083
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003779 actin binding
GO:0005515 protein binding
GO:0008022 protein C-terminus binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005856 cytoskeleton
GO:0032587 ruffle membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000147481
View Gene Order
ENSBTAG00000002448
Not yet available
Cross-References
SwissProt
TrEMBL D6REU8
UniProt Splice Variant
Entrez Gene 71096
UniGene Mm.388998 Mm.447233
RefSeq NM_001290392 NM_001290390 NM_001290393 NM_027671 XM_006495568 XM_006495569 XM_006495570 XM_006495571 XM_006495575
OMIM
CCDS CCDS35509 CCDS69860
HPRD
IMGT
MGI ID MGI:1918346
MGI Symbol Sntg1
EMBL AC102703 AC102786 AC108775 AC113286 AC114904 AC118192 AC122738 AC163389 AC164008
GenPept
RNA Seq Atlas 71096

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca