Version 5.4
Mus musculus Gene: Mmp1b
Summary
InnateDB Gene IDBG-132533.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Mmp1b
Gene Name matrix metallopeptidase 1b (interstitial collagenase)
Synonyms Mcol-B; Mcolb
Species Mus musculus
Ensembl Gene ENSMUSG00000041620
Encoded Proteins
IDBP-132535
matrix metallopeptidase 1b (interstitial collagenase)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 9:7368239-7388047
Strand Reverse strand
Band A1
Transcripts
ENSMUST00000047888 ENSMUSP00000047261
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0004222 metalloendopeptidase activity
GO:0005509 calcium ion binding
GO:0008233 peptidase activity
GO:0008237 metallopeptidase activity
GO:0008270 zinc ion binding
Biological Process
GO:0006508 proteolysis
Cellular Component
GO:0005581 collagen trimer
GO:0031012 extracellular matrix
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
KEGG
mmu05219
Bladder cancer pathway
mmu03320
PPAR signaling pathway pathway
mmu05200
Pathways in cancer pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_032007
OMIM
CCDS CCDS22805
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca