Version 5.4
Mus musculus Gene: Trim55
Summary
InnateDB Gene IDBG-132616.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Trim55
Gene Name tripartite motif-containing 55
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000060913
Encoded Proteins
IDBP-132618
tripartite motif-containing 55
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
InnateDB Annotation from Orthologs
Summary
PMID 23438823
[Homo sapiens] TRIM55 was identified in a systematic screen for positive regulators of innate immune responses.
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000147573:
The protein encoded by this gene contains a RING zinc finger, a motif known to be involved in protein-protein interactions. This protein associates transiently with microtubules, myosin, and titin during muscle sarcomere assembly. It may act as a transient adaptor and plays a regulatory role in the assembly of sarcomeres. Four alternatively spliced transcript variants encoding distinct isoforms have been described. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:19644460-19691599
Strand Forward strand
Band A2
Transcripts
ENSMUST00000029139 ENSMUSP00000029139
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 56 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 56 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0042802 identical protein binding
GO:0046872 metal ion binding
Biological Process
Cellular Component
GO:0005622 intracellular
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000147573
View Gene Order
ENSBTAG00000021009
Not yet available
Cross-References
SwissProt
TrEMBL G3X8Y1 Q8C6Y1
UniProt Splice Variant
Entrez Gene 381485
UniGene Mm.35419
RefSeq NM_001081281 XM_006535489
OMIM
CCDS CCDS38399
HPRD
IMGT
MGI ID MGI:3036269
MGI Symbol Trim55
EMBL AC141209 AK052918 CH466530
GenPept BAC35202 EDL34879
RNA Seq Atlas 381485

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca