Version 5.4
Mus musculus Gene: Zkscan3
Summary
InnateDB Gene IDBG-133560.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Zkscan3
Gene Name zinc finger with KRAB and SCAN domains 3
Synonyms 2810435N07Rik; AA408594; AI132359; mszf35; Skz1; Zf47; Zfp-47; Zfp306; Zfp307
Species Mus musculus
Ensembl Gene ENSMUSG00000021327
Encoded Proteins
IDBP-133562
zinc finger with KRAB and SCAN domains 3
IDBP-274140
zinc finger with KRAB and SCAN domains 3
IDBP-274142
zinc finger with KRAB and SCAN domains 3
IDBP-401658
zinc finger with KRAB and SCAN domains 3
IDBP-532773
zinc finger with KRAB and SCAN domains 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 13:21387013-21402755
Strand Reverse strand
Band A3.1
Transcripts
ENSMUST00000070785 ENSMUSP00000068424
ENSMUST00000116434 ENSMUSP00000112135
ENSMUST00000116433 ENSMUSP00000112134
ENSMUST00000117721 ENSMUSP00000112862
ENSMUST00000145631 ENSMUSP00000118091
ENSMUST00000151467
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0043565 sequence-specific DNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006914 autophagy
GO:0007040 lysosome organization
GO:0010507 negative regulation of autophagy
GO:0045892 negative regulation of transcription, DNA-templated
GO:0045893 positive regulation of transcription, DNA-templated
GO:2000773 negative regulation of cellular senescence
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.296071 Mm.410283 Mm.473426 Mm.486367
RefSeq NM_001145778 NM_023685 XM_006516789 XM_006516790 XM_006516791 XM_006516792
OMIM
CCDS CCDS26274
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca