Version 5.4
Mus musculus Gene: Sema3d
Summary
InnateDB Gene IDBG-135314.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sema3d
Gene Name sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
Synonyms 4631426B19Rik
Species Mus musculus
Ensembl Gene ENSMUSG00000040254
Encoded Proteins
IDBP-135316
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000153993:
Gene Information
Type Protein coding
Genomic Location Chromosome 5:12383166-12588943
Strand Forward strand
Band A1
Transcripts
ENSMUST00000030868 ENSMUSP00000030868
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0004872 receptor activity
GO:0005515 protein binding
Biological Process
GO:0007275 multicellular organismal development
GO:0007399 nervous system development
GO:0030154 cell differentiation
Cellular Component
GO:0005576 extracellular region
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000153993
View Gene Order
ENSBTAG00000024394
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu04360
Axon guidance pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa04360
Axon guidance pathway
INOH
PID NCI
Cross-References
SwissProt Q8BH34
TrEMBL Q8BJD7 Q8K4M4
UniProt Splice Variant
Entrez Gene 108151
UniGene Mm.89313
RefSeq NM_028882 XM_006503525
OMIM
CCDS CCDS39013
HPRD
IMGT
MGI ID MGI:1860118
MGI Symbol Sema3d
EMBL AF164784 AK028900 AK052671 AK087013
GenPept AAM96212 BAC26185 BAC35092 BAC39783
RNA Seq Atlas 108151

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca