Version 5.4
Mus musculus Gene: Pabpc6
Summary
InnateDB Gene IDBG-136151.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Pabpc6
Gene Name poly(A) binding protein, cytoplasmic 6
Synonyms 4932702K14Rik; AI428050; Pabpc3
Species Mus musculus
Ensembl Gene ENSMUSG00000046173
Encoded Proteins
IDBP-136153
poly(A) binding protein, cytoplasmic 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 17:9666497-9669704
Strand Reverse strand
Band A1
Transcripts
ENSMUST00000057190 ENSMUSP00000050792
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003674 molecular_function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0008143 poly(A) binding
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
KEGG
mmu03018
RNA degradation pathway
mmu03013
RNA transport pathway
mmu03015
mRNA surveillance pathway pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL Q9D4E6
UniProt Splice Variant
Entrez Gene 67543
UniGene Mm.26987
RefSeq NM_001163836
OMIM
CCDS CCDS49946
HPRD
IMGT
MGI ID MGI:1914793
MGI Symbol Pabpc6
EMBL AC134446 AK016578 AK029765
GenPept BAB30319 BAC26606
RNA Seq Atlas 67543

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca