Version 5.4
Mus musculus Gene: Fam188a
Summary
InnateDB Gene IDBG-137261.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Fam188a
Gene Name family with sequence similarity 188, member A
Synonyms 1810041E18Rik; 2310047O13Rik; 5830410F13Rik; AI447827; AW111958
Species Mus musculus
Ensembl Gene ENSMUSG00000026767
Encoded Proteins
IDBP-137263
family with sequence similarity 188, member A
IDBP-534929
family with sequence similarity 188, member A
IDBP-541665
family with sequence similarity 188, member A
IDBP-532129
family with sequence similarity 188, member A
IDBP-541663
family with sequence similarity 188, member A
IDBP-534267
family with sequence similarity 188, member A
IDBP-533257
family with sequence similarity 188, member A
IDBP-537487
family with sequence similarity 188, member A
IDBP-533836
family with sequence similarity 188, member A
IDBP-537608
family with sequence similarity 188, member A
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000148481:
C10ORF97 is a member of the caspase-associated recruitment domain (CARD) family of proteins that play a role in apoptosis (Liu et al., 2002 [PubMed 12054670]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:12347263-12419469
Strand Reverse strand
Band A1
Transcripts
ENSMUST00000028105 ENSMUSP00000028105
ENSMUST00000129489 ENSMUSP00000122501
ENSMUST00000155530 ENSMUSP00000116939
ENSMUST00000135397 ENSMUSP00000114789
ENSMUST00000144645 ENSMUSP00000116836
ENSMUST00000154899 ENSMUSP00000121476
ENSMUST00000124603 ENSMUSP00000117457
ENSMUST00000137082
ENSMUST00000130225
ENSMUST00000129993
ENSMUST00000129348 ENSMUSP00000121265
ENSMUST00000130097
ENSMUST00000153690
ENSMUST00000124515 ENSMUSP00000120193
ENSMUST00000151529 ENSMUSP00000122798
ENSMUST00000154952
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005509 calcium ion binding
GO:0005515 protein binding
Biological Process
GO:0006915 apoptotic process
GO:0008150 biological_process
Cellular Component
GO:0031965 nuclear membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000148481
View Gene Order
ENSBTAG00000010387
Not yet available
Cross-References
SwissProt
TrEMBL F7BWU4
UniProt Splice Variant
Entrez Gene 66960
UniGene Mm.34059 Mm.490498
RefSeq NM_024185 XM_006497527 XM_006497528
OMIM
CCDS CCDS15690
HPRD
IMGT
MGI ID MGI:1914210
MGI Symbol Fam188a
EMBL AL772342 AL845533
GenPept
RNA Seq Atlas 66960

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca