Version 5.4
Mus musculus Gene: Scfd1
Summary
InnateDB Gene IDBG-137853.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Scfd1
Gene Name Sec1 family domain containing 1
Synonyms 3110021P21Rik; RA410; STXBP1L2
Species Mus musculus
Ensembl Gene ENSMUSG00000020952
Encoded Proteins
IDBP-137855
Sec1 family domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000092108:
Gene Information
Type Protein coding
Genomic Location Chromosome 12:51377580-51450096
Strand Forward strand
Band B3
Transcripts
ENSMUST00000021335 ENSMUSP00000021335
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 31 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 31 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0019905 syntaxin binding
GO:0047485 protein N-terminus binding
Biological Process
GO:0001666 response to hypoxia
GO:0006890 retrograde vesicle-mediated transport, Golgi to ER
GO:0006892 post-Golgi vesicle-mediated transport
GO:0006904 vesicle docking involved in exocytosis
GO:0009636 response to toxic substance
GO:0015031 protein transport
GO:0016192 vesicle-mediated transport
GO:0060628 regulation of ER to Golgi vesicle-mediated transport
Cellular Component
GO:0005789 endoplasmic reticulum membrane
GO:0005798 Golgi-associated vesicle
GO:0005801 cis-Golgi network
GO:0005886 plasma membrane
GO:0017119 Golgi transport complex
GO:0032580 Golgi cisterna membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000092108
View Gene Order
ENSBTAG00000017565
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.404112 Mm.473098
RefSeq NM_029825
OMIM
CCDS CCDS36439
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca