Version 5.4
| Mus musculus Gene: Pcdhb16 | |||||||||
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| Summary | |||||||||
| InnateDB Gene | IDBG-139986.6 | ||||||||
| Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||
| Gene Symbol | Pcdhb16 | ||||||||
| Gene Name | protocadherin beta 16 | ||||||||
| Synonyms | Pcdhb8; PcdhbP | ||||||||
| Species | Mus musculus | ||||||||
| Ensembl Gene | ENSMUSG00000047910 | ||||||||
| Encoded Proteins |
protocadherin beta 16
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| Protein Structure | |||||||||
| Useful resources | Stemformatics EHFPI ImmGen | ||||||||
| Entrez Gene | |||||||||
| Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000120322:
This gene is a member of the protocadherin beta gene cluster, one of three related gene clusters tandemly linked on chromosome five. The gene clusters demonstrate an unusual genomic organization similar to that of B-cell and T-cell receptor gene clusters. The beta cluster contains 16 genes and 3 pseudogenes, each encoding 6 extracellular cadherin domains and a cytoplasmic tail that deviates from others in the cadherin superfamily. The extracellular domains interact in a homophilic manner to specify differential cell-cell connections. Unlike the alpha and gamma clusters, the transcripts from these genes are made up of only one large exon, not sharing common 3' exons as expected. These neural cadherin-like cell adhesion proteins are integral plasma membrane proteins. Their specific functions are unknown but they most likely play a critical role in the establishment and function of specific cell-cell neural connections. [provided by RefSeq, Jul 2008] |
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| Gene Information | |||||||||
| Type | Protein coding | ||||||||
| Genomic Location | Chromosome 18:37477768-37483035 | ||||||||
| Strand | Forward strand | ||||||||
| Band | B3 | ||||||||
| Transcripts |
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| Interactions | |||||||||
| Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
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| Gene Ontology | |||||||||
Molecular Function |
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| Biological Process |
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| Cellular Component |
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| Orthologs | |||||||||
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Species
Homo sapiens
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Gene ID
Gene Order
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| Cross-References | |||||||||
| SwissProt | |||||||||
| TrEMBL | Q8CBD2 Q91Y03 Q925C7 Q925L5 | ||||||||
| UniProt Splice Variant | |||||||||
| Entrez Gene | 93887 | ||||||||
| UniGene | Mm.197441 | ||||||||
| RefSeq | NM_053141 | ||||||||
| OMIM | |||||||||
| CCDS | CCDS29182 | ||||||||
| HPRD | |||||||||
| IMGT | |||||||||
| MGI ID | MGI:2136752 | ||||||||
| MGI Symbol | Pcdhb16 | ||||||||
| EMBL | AC020967 AF326309 AF373839 AK036267 AY013777 BC116625 CH466528 | ||||||||
| GenPept | AAI16626 AAK26066 AAK53234 AAK53441 BAC29367 EDL10155 | ||||||||
| RNA Seq Atlas | 93887 | ||||||||