Version 5.4
Mus musculus Gene: Colec10
Summary
InnateDB Gene IDBG-140528.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Colec10
Gene Name collectin sub-family member 10
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000038591
Encoded Proteins
IDBP-140530
collectin sub-family member 10
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000184374:
This gene encodes a member of the C-lectin family, proteins that possess collagen-like sequences and carbohydrate recognition domains. The other members of this family are secreted proteins and bind to carbohydrate antigens on microorganisms facilitating their recognition and removal. This gene product is a cytosolic protein, a characteristic that suggests that it may have different biological functions than other C-lectins. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 15:54410774-54466358
Strand Forward strand
Band D1
Transcripts
ENSMUST00000036737 ENSMUSP00000037867
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0005537 mannose binding
GO:0030246 carbohydrate binding
Biological Process
GO:0006952 defense response
GO:0007157 heterophilic cell-cell adhesion
GO:0009790 embryo development
Cellular Component
GO:0005576 extracellular region
GO:0005581 collagen trimer
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000184374
View Gene Order
ENSBTAG00000017343
Not yet available
Cross-References
SwissProt Q8CF98
TrEMBL B2ZP49 B2ZP50
UniProt Splice Variant
Entrez Gene 239447
UniGene Mm.82400
RefSeq NM_173422
OMIM
CCDS CCDS27469
HPRD
IMGT
MGI ID MGI:3606482
MGI Symbol Colec10
EMBL AB016429 AK028423 BC106836 BC106837 BC108945 EU677472 EU677473
GenPept AAI06837 AAI06838 AAI08946 ACD12861 ACD12862 ACD12863 ACD12864 BAC25941 BAC53954
RNA Seq Atlas 239447

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca